MMIP

Note: please read the manual before use or look at example datasets (works best with SVM model; dataset2 is taken from qiime2 tutorial) for appropriate input formats. Several new features have been implemented (check Release-Notes). Please notify us if you encounter any bugs or issues.

Note: We have installed MMIP on the new server, and operating system, many packages have been updated. As a result, some outcomes might differ due to changes in the seed and algorithms of these packages. Please let us know if you see high changes in results. (15/June/2024)

Name
Email
Institute Name
Download example dataset for Greengenes   Download example dataset for 'Other databases'

Select OTU Table:

Select Metadata:

Select Column for Grouping:      Select Group:

Note: The example Metabolomics feature table is compatible with the example dataset for Greengenes. It showcases how to format your table to function with this specific database. Similarly, you can use this example as a guide to format your table for compatibility with other databases as well.
Select Metabolomics Feature table (optional): Download example file

Note:To select 'Other Database', kindly click "Yes" below and provide the corresponding files.
Select Database:  18may2012  13_5  13_8  Other Database

Do you want to provide below mentioned files:  Yes  No
Enter abundance value to filter biom table (1%=0.01,0.25%=0.0025):
Select Model:  SVM   RandomForest   DecisionTree